ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9P1Q0_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q9P1Q0_F1_nD3

Q9P1Q0_F1_nD3

UID: 003562978

AlphaFold

Range: 231-485,596-975
AlphaFold: AF-Q9P1Q0
UniProt: Q9P1Q0 (all domains)
Gene: VPS54

Protein: Vacuolar protein sorting-associated protein 54 (Hepatocellular carcinoma protein 8) (Tumor antigen HOM-HCC-8) (Tumor antigen SLP-8p)

3D Structure

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Related Domains

Browse other domains in Vps54 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyVps54(109.4.1.514)

Pfam Families

Vps54-like protein

External Links

AlphaFold DB: Q9P1Q0 UniProt: Q9P1Q0

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 231-485,596-975