ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P39086_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/P39086_F1_nD4

P39086_F1_nD4

UID: 003565247

AlphaFold

Range: 566-675,831-860
AlphaFold: AF-P39086
UniProt: P39086 (all domains)
Gene: GRIK1

Protein: Glutamate receptor ionotropic, kainate 1 (GluK1) (Excitatory amino acid receptor 3) (EAA3) (Glutamate receptor 5) (GluR-5) (GluR5)

3D Structure

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Related Domains

Browse other domains in Lig_chan →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupVoltage-gated ion channels(5054)

HH-groupVoltage-gated ion channels(5054.1)

TT-groupVoltage-gated ion channels(5054.1.1)

FFamilyLig_chan(5054.1.1.1)

Pfam Families

PF00060Lig_chan

Ligand-gated ion channel

ClanCL0030Ion_channel

External Links

AlphaFold DB: P39086 UniProt: P39086

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 566-675,831-860