ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q8N1B4_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q8N1B4_F1_nD2

Q8N1B4_F1_nD2

UID: 003566834

AlphaFold

Range: 156-723
AlphaFold: AF-Q8N1B4
UniProt: Q8N1B4 (all domains)
Gene: VPS52

Protein: Vacuolar protein sorting-associated protein 52 homolog (SAC2 suppressor of actin mutations 2-like protein)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Vps52_CC, Vps52_C →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyVps52_CC, Vps52_C(109.4.1.1307)

Pfam Families

PF04129Vps52_CC

Vps52/Sac2 family, coiled-coil

ClanCL0020TPR

PF20655Vps52_C

Vps52, C-terminal

ClanCL0020TPR

External Links

AlphaFold DB: Q8N1B4 UniProt: Q8N1B4

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 156-723