ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9GZR1_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q9GZR1_F1_nD2

Q9GZR1_F1_nD2

UID: 003567828

AlphaFold

Range: 641-780,966-1085
AlphaFold: AF-Q9GZR1
UniProt: Q9GZR1 (all domains)
Gene: SENP6

Protein: Sentrin-specific protease 6 (EC 3.4.22.-) (SUMO-1-specific protease 1) (Sentrin/SUMO-specific protease SENP6)

3D Structure

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Related Domains

Browse other domains in Peptidase_C48 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyPeptidase_C48(219.1.1.16)

Pfam Families

PF02902Peptidase_C48

Ulp1 protease family, C-terminal catalytic domain

ClanCL0125Peptidase_CA

External Links

AlphaFold DB: Q9GZR1 UniProt: Q9GZR1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 641-780,966-1085