ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q8NB12_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q8NB12_F1_nD1

Q8NB12_F1_nD1

UID: 003569589

AlphaFold

Range: 1-280
AlphaFold: AF-Q8NB12
UniProt: Q8NB12 (all domains)
Gene: SMYD1

Protein: Histone-lysine N-methyltransferase SMYD1 (EC 2.1.1.354) (SET and MYND domain-containing protein 1)

3D Structure

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Related Domains

Browse other domains in SET, zf-MYND →

Classification

AArchitecturebeta barrels(a.1)

XX-groupbeta-clip(70)

HH-groupSET domain-like(70.3)

TT-groupSET domain-like(70.3.1)

FFamilySET, zf-MYND(70.3.1.11)

Pfam Families

SET domain

ClanCL0489SAF

PF01753zf-MYND

MYND finger

ClanCL0175TRASH

External Links

AlphaFold DB: Q8NB12 UniProt: Q8NB12

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-280