ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9H4B7_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q9H4B7_F1_nD2

Q9H4B7_F1_nD2

UID: 003569966

AlphaFold

Range: 246-430
AlphaFold: AF-Q9H4B7
UniProt: Q9H4B7 (all domains)
Gene: TUBB1

Protein: Tubulin beta-1 chain

3D Structure

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Related Domains

Browse other domains in Tubulin_C →

Classification

AArchitecturea+b three layers(a.12)

XX-groupBacillus chorismate mutase-like(301)

HH-groupTubulin C-terminal domain-like(301.6)

TT-groupTubulin C-terminal domain-like(301.6.1)

FFamilyTubulin_C(301.6.1.1)

Ligands

in contact, ≤ 4 Å

DB00309
drugDrugBank DB00309within 5 Å only
Paclitaxel
drugDrugBank DB01229within 5 Å only
Docetaxel

Pfam Families

PF03953Tubulin_C

Tubulin C-terminal domain

ClanCL0442Tubulin_C

External Links

AlphaFold DB: Q9H4B7 UniProt: Q9H4B7

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 246-430

drugDrugBank DB01248within 5 Å only

Epothilone D

drugDrugBank DB01873within 5 Å only

Patupilone

drugDrugBank DB03010within 5 Å only

DB06772

drugDrugBank DB06772within 5 Å only

Eribulin

drugDrugBank DB08871within 5 Å only

DB12334

drugDrugBank DB12334within 5 Å only

DB12695

drugDrugBank DB12695within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.