ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9Y5B0_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q9Y5B0_F1_nD1

Q9Y5B0_F1_nD1

UID: 003573252

AlphaFold

Range: 21-115
AlphaFold: AF-Q9Y5B0
UniProt: Q9Y5B0 (all domains)
Gene: CTDP1

Protein: RNA polymerase II subunit A C-terminal domain phosphatase (EC 3.1.3.16) (TFIIF-associating CTD phosphatase)

3D Structure

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Related Domains

Browse other domains in BSH_Fcp1 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupalpha/beta-Hammerhead/Barrel-sandwich hybrid(325)

HH-groupalpha/beta-Hammerhead/Barrel-sandwich hybrid(325.1)

TT-groupSingle hybrid motif(325.1.7)

FFamilyBSH_Fcp1(325.1.7.23)

Pfam Families

PF26077BSH_Fcp1

Fcp1 barrel-sandwich hybrid domain

ClanCL0105Hybrid

External Links

AlphaFold DB: Q9Y5B0 UniProt: Q9Y5B0

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 21-115