ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A3P7E2C3_F1_nD5 - ECOD Domain | ECOD

ECOD/Domains/A0A3P7E2C3_F1_nD5

A0A3P7E2C3_F1_nD5

UID: 003574222

AlphaFold

Range: 496-570,596-640
AlphaFold: AF-A0A3P7E2C3
UniProt: A0A3P7E2C3 (all domains)
Gene: WBA_LOCUS4213

Protein: tRNA:m(4)X modification enzyme TRM13 (EC 2.1.1.225)

3D Structure

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Related Domains

Browse other domains in DUF3456 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupSaposin-like(198)

HH-groupSaposin-like(198.1)

TT-groupSaposin-like(198.1.1)

FFamilyDUF3456(198.1.1.4)

Pfam Families

PF11938DUF3456

TLR4 regulator and MIR-interacting MSAP

External Links

AlphaFold DB: A0A3P7E2C3 UniProt: A0A3P7E2C3

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 496-570,596-640