ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

A0A3P7EP02_F1_nD5 - ECOD Domain | ECOD

ECOD/Domains/A0A3P7EP02_F1_nD5

A0A3P7EP02_F1_nD5

UID: 003580929

AlphaFold

Range: 481-665
AlphaFold: AF-A0A3P7EP02
UniProt: A0A3P7EP02 (all domains)
Gene: WBA_LOCUS12709

Protein: DNA-directed RNA polymerase (EC 2.7.7.6)

3D Structure

Loading viewer...

Related Domains

Browse other domains in RNA_pol_Rpb1_6 →

Classification

AArchitecturea+b complex topology(a.14)

XX-grouphelical domain in yeast RNA-polymerases(4957)

HH-groupthird helical domain in yeast RNA-polymerase II beta-prime subunit(4957.1)

TT-groupthird helical domain in yeast RNA-polymerase II beta-prime subunit(4957.1.1)

FFamilyRNA_pol_Rpb1_6(4957.1.1.1)

Pfam Families

PF04992RNA_pol_Rpb1_6

RNA polymerase Rpb1, domain 6

External Links

AlphaFold DB: A0A3P7EP02 UniProt: A0A3P7EP02

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 481-665