ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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A0A132ZFY3_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A0A132ZFY3_F1_nD2

A0A132ZFY3_F1_nD2

UID: 003587226

AlphaFold

Range: 56-235
AlphaFold: AF-A0A132ZFY3
UniProt: A0A132ZFY3 (all domains)
Gene: yqeH

Protein: Ribosome biogenesis GTPase YqeH

3D Structure

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Related Domains

Browse other domains in MMR_HSR1, RsgA_GTPase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyMMR_HSR1, RsgA_GTPase(2004.1.1.422)

Pfam Families

PF01926MMR_HSR1

50S ribosome-binding GTPase

ClanCL0023P-loop_NTPase

PF03193RsgA_GTPase

RsgA GTPase

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: A0A132ZFY3 UniProt: A0A132ZFY3

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 56-235