ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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A0A132ZKB5_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A132ZKB5_F1_nD1

A0A132ZKB5_F1_nD1

UID: 003587403

AlphaFold

Range: 1-80
AlphaFold: AF-A0A132ZKB5
UniProt: A0A132ZKB5 (all domains)
Gene: rqcP

Protein: RQC P-site tRNA stabilizing factor (RqcP) (Ribosome-associated protein quality control protein P)

3D Structure

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Related Domains

Browse other domains in S4 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupAlpha-L RNA-binding motif(221.1.2)

FFamilyS4(221.1.2.5)

Pfam Families

S4 domain

ClanCL0492S4

External Links

AlphaFold DB: A0A132ZKB5 UniProt: A0A132ZKB5

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-80