ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A133CMS4_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A133CMS4_F1_nD1

A0A133CMS4_F1_nD1

UID: 003587443

AlphaFold

Range: 46-155
AlphaFold: AF-A0A133CMS4
UniProt: A0A133CMS4 (all domains)
Gene: traL

Protein: ABC transporter membrane-spanning permease (ABC transporter permease) (Type IV conjugative transfer system protein TraL)

3D Structure

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Related Domains

Browse other domains in ABC2_membrane_3 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyABC2_membrane_3(7523.1.1.22)

Pfam Families

PF12698ABC2_membrane_3

ABC-2 family transporter protein

ClanCL0181ABC-2

External Links

AlphaFold DB: A0A133CMS4 UniProt: A0A133CMS4

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 46-155