ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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A0A133CMQ6_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/A0A133CMQ6_F1_nD3

A0A133CMQ6_F1_nD3

UID: 003587510

AlphaFold

Range: 231-380
UniProt: A0A133CMQ6 (all domains)
Gene: rpoN

Protein: RNA polymerase factor sigma-54 (RNA polymerase sigma-54 factor)

3D Structure

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Related Domains

Browse other domains in Sigma54_DBD →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupThree-helical HTH(101.1.1)

FFamilySigma54_DBD(101.1.1.32)

Pfam Families

PF04552Sigma54_DBD

Sigma-54, DNA binding domain

ClanCL0123HTH

External Links

UniProt: A0A133CMQ6

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