ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
RCSB PDB
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A0A133CJL9_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A0A133CJL9_F1_nD2

A0A133CJL9_F1_nD2

UID: 003587670

AlphaFold

Range: 86-165
UniProt: A0A133CJL9 (all domains)
Gene: A5804_001894

Protein: RNA-binding protein (S4 domain-containing protein)

3D Structure

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Related Domains

Browse other domains in YlmH_RBD →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupRNA-binding domain, RBD(304.9)

TT-groupRNA-binding domain, RBD(304.9.1)

FFamilyYlmH_RBD(304.9.1.27)

Pfam Families

PF17774YlmH_RBD

Putative RNA-binding domain in YlmH

ClanCL0221RRM

External Links

UniProt: A0A133CJL9

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