ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A133CSM1_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A0A133CSM1_F1_nD2

A0A133CSM1_F1_nD2

UID: 003588173

AlphaFold

Range: 71-180
AlphaFold: AF-A0A133CSM1
UniProt: A0A133CSM1 (all domains)
Gene: xerC_8

Protein: Site-specific integrase (Site-specific tyrosine recombinase XerC-family protein)

3D Structure

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Related Domains

Browse other domains in Phage_int_SAM_3 →

Classification

AArchitecturealpha arrays(a.6)

XX-grouplambda integrase-N-like(186)

HH-grouplambda integrase-N(186.1)

TT-grouplambda integrase-N(186.1.1)

FFamilyPhage_int_SAM_3(186.1.1.5)

Pfam Families

PF14659Phage_int_SAM_3

Phage integrase, N-terminal SAM-like domain

ClanCL0469l-integrase_N

External Links

AlphaFold DB: A0A133CSM1 UniProt: A0A133CSM1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 71-180