ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A133D019_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A133D019_F1_nD1

A0A133D019_F1_nD1

UID: 003588576

AlphaFold

Range: 26-480
AlphaFold: AF-A0A133D019
UniProt: A0A133D019 (all domains)
Gene: A5804_002458

Protein: ABC transporter substrate-binding protein (DUF3502 domain-containing protein) (Extracellular solute-binding protein)

3D Structure

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Related Domains

Browse other domains in DUF3502, SBP_bac_8 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyDUF3502, SBP_bac_8(7523.1.1.59)

Pfam Families

PF12010DUF3502

Domain of unknown function (DUF3502)

PF13416SBP_bac_8

Bacterial extracellular solute-binding protein

ClanCL0177PBP

External Links

AlphaFold DB: A0A133D019 UniProt: A0A133D019

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 26-480