ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A133CMT3_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A133CMT3_F1_nD1

A0A133CMT3_F1_nD1

UID: 003588598

AlphaFold

Range: 1-75
AlphaFold: AF-A0A133CMT3
UniProt: A0A133CMT3 (all domains)
Gene: rnhC

Protein: Ribonuclease HIII (RNase HIII) (EC 3.1.26.4)

3D Structure

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Related Domains

Browse other domains in DUF3378 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupTBP-like(331)

HH-groupTATA-box binding protein-like(331.1)

TT-groupTATA-box binding protein-like(331.1.1)

FFamilyDUF3378(331.1.1.6)

Pfam Families

PF11858DUF3378

Domain of unknown function (DUF3378)

ClanCL0407TBP-like

External Links

AlphaFold DB: A0A133CMT3 UniProt: A0A133CMT3

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-75