ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A133CQ39_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/A0A133CQ39_F1_nD3

A0A133CQ39_F1_nD3

UID: 003588747

AlphaFold

Range: 341-465
AlphaFold: AF-A0A133CQ39
UniProt: A0A133CQ39 (all domains)
Gene: B1P95_10315

Protein: ErfK/YbiS/YcfS/YnhG family protein (L,D-transpeptidase family protein) (L,D-transpeptidase/peptidoglycan binding protein)

3D Structure

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Related Domains

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Classification

AArchitecturebeta complex topology(a.5)

XX-groupL,D-transpeptidase catalytic domain-like(4091)

HH-groupL,D-transpeptidase catalytic domain-like(4091.1)

TT-groupL,D-transpeptidase catalytic domain-like(4091.1.1)

FFamilyYkuD(4091.1.1.1)

Pfam Families

L,D-transpeptidase catalytic domain

ClanCL0508YkuD

External Links

AlphaFold DB: A0A133CQ39 UniProt: A0A133CQ39

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 341-465