ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A132P506_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A132P506_F1_nD1

A0A132P506_F1_nD1

UID: 003588922

AlphaFold

Range: 1-35
AlphaFold: AF-A0A132P506
UniProt: A0A132P506 (all domains)
Gene: phnA

Protein: Alkylphosphonate utilization operon protein PhnA (Alkylphosphonate utilization protein) (Phosphonoacetate hydrolase) (Zinc ribbon domain-containing protein YjdM)

3D Structure

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Related Domains

Browse other domains in YjdM_Zn_Ribbon →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupRubredoxin-related(375.1)

TT-groupRubredoxin-related(375.1.1)

FFamilyYjdM_Zn_Ribbon(375.1.1.40)

Pfam Families

PF08274Zn_Ribbon_YjdM

PhnA Zinc-Ribbon

ClanCL0167Zn_Beta_Ribbon

External Links

AlphaFold DB: A0A132P506 UniProt: A0A132P506

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-35