ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5D860_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5D860_F1_nD1

Q5D860_F1_nD1

UID: 003589027

AlphaFold

Range: 1-180
AlphaFold: AF-Q5D860
UniProt: Q5D860 (all domains)
Gene: ermB

Protein: rRNA adenine N-6-methyltransferase (EC 2.1.1.184) (Macrolide-lincosamide-streptogramin B resistance protein)

3D Structure

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Related Domains

Browse other domains in RrnaAD →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyRrnaAD(2003.1.5.2)

Pfam Families

Ribosomal RNA adenine dimethylase

ClanCL0063NADP_Rossmann

External Links

AlphaFold DB: Q5D860 UniProt: Q5D860

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-180