ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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A0A132P4Q1_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A132P4Q1_F1_nD1

A0A132P4Q1_F1_nD1

UID: 003589428

AlphaFold

Range: 1-70
AlphaFold: AF-A0A132P4Q1
UniProt: A0A132P4Q1 (all domains)
Gene: rsmE

Protein: Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.193)

3D Structure

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Related Domains

Browse other domains in PUA_4 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupPUA domain(1.1.9)

FFamilyPUA_4(1.1.9.20)

Pfam Families

RNA methyltransferase PUA domain

ClanCL0178PUA

External Links

AlphaFold DB: A0A132P4Q1 UniProt: A0A132P4Q1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-70