ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A133CJD6_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/A0A133CJD6_F1_nD4

A0A133CJD6_F1_nD4

UID: 003589854

AlphaFold

Range: 311-375
AlphaFold: AF-A0A133CJD6
UniProt: A0A133CJD6 (all domains)
Gene: xerC_2

Protein: Site-specific integrase (Site-specific tyrosine recombinase XerC-family protein) (Tyrosine-type recombinase/integrase)

3D Structure

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Related Domains

Browse other domains in Phage_integrase →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupDNA breaking-rejoining enzymes(101.1.8)

FFamilyPhage_integrase(101.1.8.1)

Pfam Families

PF00589Phage_integrase

Phage integrase family

ClanCL0382DNA-mend

External Links

AlphaFold DB: A0A133CJD6 UniProt: A0A133CJD6

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 311-375