ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A132Z4E9_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A132Z4E9_F1_nD1

A0A132Z4E9_F1_nD1

UID: 003589861

AlphaFold

Range: 6-115
AlphaFold: AF-A0A132Z4E9
UniProt: A0A132Z4E9 (all domains)
Gene: rnmV

Protein: Ribonuclease M5 (EC 3.1.26.8) (RNase M5) (Ribosomal RNA terminal maturase M5)

3D Structure

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Related Domains

Browse other domains in Toprim →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHAD domain-like(2006)

HH-groupHAD domain-related(2006.1)

TT-groupToprim domain(2006.1.3)

FFamilyToprim(2006.1.3.2)

Pfam Families

Toprim domain

ClanCL0413Toprim-like

External Links

AlphaFold DB: A0A132Z4E9 UniProt: A0A132Z4E9

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-115