ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A133CJD6_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A0A133CJD6_F1_nD2

A0A133CJD6_F1_nD2

UID: 003589876

AlphaFold

Range: 61-160
AlphaFold: AF-A0A133CJD6
UniProt: A0A133CJD6 (all domains)
Gene: xerC_2

Protein: Site-specific integrase (Site-specific tyrosine recombinase XerC-family protein) (Tyrosine-type recombinase/integrase)

3D Structure

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Related Domains

Browse other domains in Phage_int_SAM_5 →

Classification

AArchitecturealpha arrays(a.6)

XX-grouplambda integrase-N-like(186)

HH-grouplambda integrase-N(186.1)

TT-grouplambda integrase-N(186.1.1)

FFamilyPhage_int_SAM_5(186.1.1.3)

Pfam Families

PF13102Phage_int_SAM_5

Phage integrase SAM-like domain

ClanCL0469l-integrase_N

External Links

AlphaFold DB: A0A133CJD6 UniProt: A0A133CJD6

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 61-160