ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A133CJD6_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A133CJD6_F1_nD1

A0A133CJD6_F1_nD1

UID: 003589882

AlphaFold

Range: 1-50
AlphaFold: AF-A0A133CJD6
UniProt: A0A133CJD6 (all domains)
Gene: xerC_2

Protein: Site-specific integrase (Site-specific tyrosine recombinase XerC-family protein) (Tyrosine-type recombinase/integrase)

3D Structure

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Related Domains

Browse other domains in Arm-DNA-bind_4 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupYegP-like(4325)

HH-groupYegP-like(4325.1)

TT-groupYegP-like(4325.1.1)

FFamilyArm-DNA-bind_4(4325.1.1.7)

Pfam Families

PF14657Arm-DNA-bind_4

Arm DNA-binding domain

ClanCL0081MBD-like

External Links

AlphaFold DB: A0A133CJD6 UniProt: A0A133CJD6

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-50