ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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A0A133CJL3_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/A0A133CJL3_F1_nD3

A0A133CJL3_F1_nD3

UID: 003590026

AlphaFold

Range: 56-95,186-260,476-490
AlphaFold: AF-A0A133CJL3
UniProt: A0A133CJL3 (all domains)

Protein: deleted

3D Structure

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Related Domains

Browse other domains in PBP_dimer →

Classification

AArchitecturebeta complex topology(a.5)

XX-groupPenicillin binding protein dimerisation domain(3702)

HH-groupPenicillin binding protein dimerisation domain(3702.1)

TT-groupPenicillin binding protein dimerisation domain(3702.1.1)

FFamilyPBP_dimer(3702.1.1.1)

Pfam Families

PF03717PBP_dimer

Penicillin-binding Protein dimerisation domain

ClanCL0776PBP_NTD

External Links

AlphaFold DB: A0A133CJL3 UniProt: A0A133CJL3

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 56-95,186-260,476-490