ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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A0A133CPY5_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A133CPY5_F1_nD1

A0A133CPY5_F1_nD1

UID: 003590526

AlphaFold

Range: 36-115
UniProt: A0A133CPY5 (all domains)
Gene: rlmB

Protein: 23S rRNA (Guanosine(2251)-2'-O)-methyltransferase RlmB (RNA methyltransferase, TrmH family, group 3) (TrmH family tRNA/rRNA methyltransferase (EC 2.1.1.-))

3D Structure

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Related Domains

Browse other domains in SpoU_sub_bind →

Classification

AArchitecturea+b three layers(a.12)

XX-groupBacillus chorismate mutase-like(301)

HH-groupL30e-like(301.1)

TT-groupL30e-like(301.1.1)

FFamilySpoU_sub_bind(301.1.1.5)

Pfam Families

PF08032SpoU_sub_bind

RNA 2'-O ribose methyltransferase substrate binding

ClanCL0101PELOTA

External Links

UniProt: A0A133CPY5

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