ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A133D087_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/A0A133D087_F1_nD3

A0A133D087_F1_nD3

UID: 003590669

AlphaFold

Range: 181-305,336-345
AlphaFold: AF-A0A133D087
UniProt: A0A133D087 (all domains)
Gene: DKP91_02475

Protein: GntR family transcriptional regulator (LacI family transcriptional regulator) (Substrate-binding domain-containing protein)

3D Structure

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Related Domains

Browse other domains in Peripla_BP_3 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupPeriplasmic binding protein-like I(2007.1.2)

FFamilyPeripla_BP_3(2007.1.2.10)

Pfam Families

PF13377Peripla_BP_3

Periplasmic binding protein-like domain

ClanCL0144Periplas_BP

External Links

AlphaFold DB: A0A133D087 UniProt: A0A133D087

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 181-305,336-345