ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

A0A133CPC3_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/A0A133CPC3_F1_nD3

A0A133CPC3_F1_nD3

UID: 003590699

AlphaFold

Range: 401-650
AlphaFold: AF-A0A133CPC3
UniProt: A0A133CPC3 (all domains)
Gene: parE

Protein: DNA topoisomerase 4 subunit B (EC 5.6.2.2) (Topoisomerase IV subunit B)

3D Structure

Loading viewer...

Related Domains

Browse other domains in DNA_gyraseB_C,Toprim →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHAD domain-like(2006)

HH-groupHAD domain-related(2006.1)

TT-groupToprim domain(2006.1.3)

FFamilyDNA_gyraseB_C,Toprim(2006.1.3.1)

Pfam Families

PF00986DNA_gyraseB_C

DNA gyrase B subunit, carboxyl terminus

Toprim domain

ClanCL0413Toprim-like

External Links

AlphaFold DB: A0A133CPC3 UniProt: A0A133CPC3

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 401-650