ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

A0A133CMQ6_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A0A133CMQ6_F1_nD2

A0A133CMQ6_F1_nD2

UID: 003590898

AlphaFold

Range: 76-225
UniProt: A0A133CMQ6 (all domains)
Gene: rpoN

Protein: RNA polymerase factor sigma-54 (RNA polymerase sigma-54 factor)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Sigma54_CBD →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupSigma54 core-binding domain(101.1.20)

FFamilySigma54_CBD(101.1.20.1)

Pfam Families

PF04963Sigma54_CBD

Sigma-54 factor, core binding domain

ClanCL0123HTH

External Links

UniProt: A0A133CMQ6

Downloads