ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A4HVH9_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/A4HVH9_F1_nD3

A4HVH9_F1_nD3

UID: 003591602

AlphaFold

Range: 861-975
AlphaFold: AF-A4HVH9
UniProt: A4HVH9 (all domains)
Gene: LINJ_13_0390

Protein: U5 small nuclear ribonucleoprotein 200 kDa helicase

3D Structure

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Related Domains

Browse other domains in SNRNP200_wHTH →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupwinged helix domain(101.1.2)

FFamilySNRNP200_wHTH(101.1.2.392)

Pfam Families

PF23445WHD_SNRNP200

Winged Helix-turn-helix domain

ClanCL0123HTH

External Links

AlphaFold DB: A4HVH9 UniProt: A4HVH9

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 861-975