ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A4I4U4_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A4I4U4_F1_nD1

A4I4U4_F1_nD1

UID: 003598918

AlphaFold

Range: 6-80,102-130
AlphaFold: AF-A4I4U4
UniProt: A4I4U4 (all domains)
Gene: LINJ_29_2410

Protein: Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)

3D Structure

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Related Domains

Browse other domains in zf-UBP_var →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupRING/U-box(376.1.1)

FFamilyzf-UBP_var(376.1.1.32)

Pfam Families

PF17807zf-UBP_var

Variant UBP zinc finger

ClanCL0229RING

External Links

AlphaFold DB: A4I4U4 UniProt: A4I4U4

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-80,102-130