ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9GPZ9_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q9GPZ9_F1_nD3

Q9GPZ9_F1_nD3

UID: 003599060

AlphaFold

Range: 256-455
AlphaFold: AF-Q9GPZ9
UniProt: Q9GPZ9 (all domains)
Gene: LINJ_34_3220

Protein: DNA topoisomerase I (EC 5.6.2.1) (DNA topoisomerase 1)

3D Structure

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Related Domains

Browse other domains in Topoisom_I →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupDNA breaking-rejoining enzymes(101.1.8)

FFamilyTopoisom_I(101.1.8.2)

Pfam Families

PF01028Topoisom_I

Eukaryotic DNA topoisomerase I, catalytic core

ClanCL0382DNA-mend

External Links

AlphaFold DB: Q9GPZ9 UniProt: Q9GPZ9

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 256-455