ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A4ID88_F1_nD5 - ECOD Domain | ECOD

ECOD/Domains/A4ID88_F1_nD5

A4ID88_F1_nD5

UID: 003600005

AlphaFold

Range: 501-560,681-750
AlphaFold: AF-A4ID88
UniProt: A4ID88 (all domains)
Gene: LINJ_36_3150

Protein: Putative ATP-dependent RNA helicase (EC 3.6.1.-)

3D Structure

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Related Domains

Browse other domains in MTR4_beta-barrel →

Classification

AArchitectureextended segments(a.20)

XX-groupHelical arch in Ski2-like helicases(3324)

HH-groupHelical arch in Ski2-like helicases(3324.1)

TT-groupHelical arch in Ski2-like helicases(3324.1.1)

FFamilyMTR4_beta-barrel(3324.1.1.1)

Pfam Families

PF13234MTR4_beta-barrel

Mtr4-like, beta-barrel domain

ClanCL0010SH3

External Links

AlphaFold DB: A4ID88 UniProt: A4ID88

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 501-560,681-750