ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A4HXJ2_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A4HXJ2_F1_nD2

A4HXJ2_F1_nD2

UID: 003600228

AlphaFold

Range: 461-483,561-835
AlphaFold: AF-A4HXJ2
UniProt: A4HXJ2 (all domains)
Gene: LINJ_17_1250

Protein: Putative 5'-3' exonuclease (EC 3.1.11.-)

3D Structure

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Related Domains

Browse other domains in XRN_M →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHelical domain in 5'->3' exoribonucleases(3279)

HH-groupHelical domain in 5'->3' exoribonucleases(3279.1)

TT-groupHelical domain in 5'->3' exoribonucleases(3279.1.1)

FFamilyXRN_M(3279.1.1.1)

Pfam Families

Xrn1 helical domain

External Links

AlphaFold DB: A4HXJ2 UniProt: A4HXJ2

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 461-483,561-835