ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

A4I0P4_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A4I0P4_F1_nD1

A4I0P4_F1_nD1

UID: 003600364

AlphaFold

Range: 41-335,411-460
AlphaFold: AF-A4I0P4
UniProt: A4I0P4 (all domains)
Gene: LINJ_24_0550

Protein: tRNA:m(4)X modification enzyme TRM13 (EC 2.1.1.225)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Methyltransf_32 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyMethyltransf_32(2003.1.5.97)

Pfam Families

PF13679Methyltransf_32

Methyltransferase domain

ClanCL0063NADP_Rossmann

External Links

AlphaFold DB: A4I0P4 UniProt: A4I0P4

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 41-335,411-460