ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A4I5G0_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A4I5G0_F1_nD2

A4I5G0_F1_nD2

UID: 003601545

AlphaFold

Range: 561-655,706-760,841-925,971-1040
AlphaFold: AF-A4I5G0
UniProt: A4I5G0 (all domains)
Gene: LINJ_30_1350

Protein: Putative vacuolar assembly protein vps41

3D Structure

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Related Domains

Browse other domains in TPR_Vps41 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyTPR_Vps41(109.4.1.958)

Pfam Families

PF23556TPR_Vps41

Vps41 TPR-like region

ClanCL0020TPR

External Links

AlphaFold DB: A4I5G0 UniProt: A4I5G0

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 561-655,706-760,841-925,971-1040