ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q58454_F1_nD5 - ECOD Domain | ECOD

ECOD/Domains/Q58454_F1_nD5

Q58454_F1_nD5

UID: 003602142

AlphaFold

Range: 556-660
AlphaFold: AF-Q58454
UniProt: Q58454 (all domains)
Gene: MJ1054

Protein: Uncharacterized protein MJ1054 (EC 1.1.1.-) [Cleaved into: Mja UDPGD intein]

3D Structure

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Related Domains

Browse other domains in LAGLIDADG_3 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupHoming endonucleases-like(242)

HH-groupHoming endonucleases(242.1)

TT-groupHoming endonucleases(242.1.1)

FFamilyLAGLIDADG_3(242.1.1.7)

Pfam Families

PF14528LAGLIDADG_3

LAGLIDADG-like domain

ClanCL0324Homing_endonuc

External Links

AlphaFold DB: Q58454 UniProt: Q58454

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 556-660