ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q58192_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q58192_F1_nD2

Q58192_F1_nD2

UID: 003603718

AlphaFold

Range: 101-220,386-435
AlphaFold: AF-Q58192
UniProt: Q58192 (all domains)
Gene: tfb

Protein: Transcription initiation factor IIB (TFIIB) [Cleaved into: Endonuclease Mja Tfb (EC 3.1.-.-) (Mja TFIIB intein) (Mja Tfb intein)]

3D Structure

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Related Domains

Browse other domains in Intein_splicing →

Classification

AArchitecturebeta complex topology(a.5)

XX-groupHedgehog/intein(69)

HH-groupHedgehog/intein(69.1)

TT-groupHint(69.1.1)

FFamilyIntein_splicing(69.1.1.4)

Pfam Families

PF14890Intein_splicing

Intein splicing domain

ClanCL0363H-int

External Links

AlphaFold DB: Q58192 UniProt: Q58192

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 101-220,386-435