ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q59062_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q59062_F1_nD2

Q59062_F1_nD2

UID: 003603887

AlphaFold

Range: 266-370
AlphaFold: AF-Q59062
UniProt: Q59062 (all domains)
Gene: csm4

Protein: CRISPR system Cms protein Csm4 (CRISPR type III-A associated RAMP protein Csm4)

3D Structure

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Related Domains

Browse other domains in Csm4_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupCRISPR transcript (pre-crRNA) processing endoribonuclease-related(304.51)

TT-groupCRISPR transcript (pre-crRNA) processing endoribonuclease-related(304.51.1)

FFamilyCsm4_C(304.51.1.10)

Pfam Families

CRISPR Csm4 C-terminal domain

ClanCL0362RAMPS-Cas5-like

External Links

AlphaFold DB: Q59062 UniProt: Q59062

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 266-370