ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q58192_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q58192_F1_nD1

Q58192_F1_nD1

UID: 003604042

AlphaFold

Range: 36-90
AlphaFold: AF-Q58192
UniProt: Q58192 (all domains)
Gene: tfb

Protein: Transcription initiation factor IIB (TFIIB) [Cleaved into: Endonuclease Mja Tfb (EC 3.1.-.-) (Mja TFIIB intein) (Mja Tfb intein)]

3D Structure

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Related Domains

Browse other domains in TF_Zn_Ribbon →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupRubredoxin-related(375.1)

TT-groupRubredoxin-related(375.1.1)

FFamilyTF_Zn_Ribbon(375.1.1.37)

Pfam Families

PF08271Zn_Ribbon_TF

TFIIB zinc-binding

ClanCL0167Zn_Beta_Ribbon

External Links

AlphaFold DB: Q58192 UniProt: Q58192

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 36-90