ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q58271_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q58271_F1_nD2

Q58271_F1_nD2

UID: 003604488

AlphaFold

Range: 216-385
AlphaFold: AF-Q58271
UniProt: Q58271 (all domains)
Gene: rnj

Protein: Ribonuclease J (RNase J) (EC 3.1.-.-) (RNase J3)

3D Structure

Loading viewer...

Related Domains

Browse other domains in RNase_J_b_CASP →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyRNase_J_b_CASP(2004.1.1.231)

Pfam Families

PF22505RNase_J_b_CASP

Ribonuclease J, beta-CASP domain

External Links

AlphaFold DB: Q58271 UniProt: Q58271

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 216-385