ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q58824_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q58824_F1_nD2

Q58824_F1_nD2

UID: 003604644

AlphaFold

Range: 86-495
AlphaFold: AF-Q58824
UniProt: Q58824 (all domains)
Gene: herA

Protein: Probable DNA double-strand break repair helicase HerA (EC 5.6.2.3) (EC 5.6.2.4) (Probable bidirectional DNA 3'-5' and 5'-3' helicase HerA)

3D Structure

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Related Domains

Browse other domains in DUF87, HerA_C, TrwB_AAD_bind →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyDUF87, HerA_C, TrwB_AAD_bind(2004.1.1.712)

Pfam Families

Helicase HerA, central domain

ClanCL0023P-loop_NTPase

Helicase HerA-like C-terminal

ClanCL0023P-loop_NTPase

PF10412TrwB_AAD_bind

Type IV secretion-system coupling protein DNA-binding domain

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: Q58824 UniProt: Q58824

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 86-495