ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q57X05_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q57X05_F1_nD2

Q57X05_F1_nD2

UID: 003605809

AlphaFold

Range: 26-45,121-235,266-465
AlphaFold: AF-Q57X05
UniProt: Q57X05 (all domains)
Gene: Tb08.26E13.510

Protein: tRNA carboxymethyluridine synthase (EC 2.3.1.311)

3D Structure

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Related Domains

Browse other domains in Radical_SAM,Radical_SAM_C →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyRadical_SAM,Radical_SAM_C(2002.1.1.126)

Pfam Families

PF04055Radical_SAM

Radical SAM superfamily

ClanCL0036TIM_barrel

PF16199Radical_SAM_C

Radical_SAM C-terminal domain

External Links

AlphaFold DB: Q57X05 UniProt: Q57X05

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 26-45,121-235,266-465