ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q38BL8_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q38BL8_F1_nD1

Q38BL8_F1_nD1

UID: 003607577

AlphaFold

Range: 81-160,191-225
AlphaFold: AF-Q38BL8
UniProt: Q38BL8 (all domains)
Gene: Tb10.70.3550

Protein: RRM domain-containing protein

3D Structure

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Related Domains

Browse other domains in Nup35_RRM_2 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupRNA-binding domain, RBD(304.9)

TT-groupRNA-binding domain, RBD(304.9.1)

FFamilyNup35_RRM_2(304.9.1.58)

Pfam Families

PF14605Nup35_RRM_2

Nup53/35/40-type RNA recognition motif

ClanCL0221RRM

External Links

AlphaFold DB: Q38BL8 UniProt: Q38BL8

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 81-160,191-225