ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q388F1_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q388F1_F1_nD1

Q388F1_F1_nD1

UID: 003610297

AlphaFold

Range: 6-320
AlphaFold: AF-Q388F1
UniProt: Q388F1 (all domains)
Gene: Tb10.61.2200

Protein: Protein SEY1 homolog (EC 3.6.5.-)

3D Structure

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Related Domains

Browse other domains in RHD3_GTPase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyRHD3_GTPase(2004.1.1.133)

Pfam Families

PF05879RHD3_GTPase

Root hair defective 3 GTP-binding protein (RHD3) GTPase domain

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: Q388F1 UniProt: Q388F1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-320