ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q8IFI0_F1_nD5 - ECOD Domain | ECOD

ECOD/Domains/Q8IFI0_F1_nD5

Q8IFI0_F1_nD5

UID: 003611464

AlphaFold

Range: 616-805
AlphaFold: AF-Q8IFI0
UniProt: Q8IFI0 (all domains)
Gene: TB927.1.220

Protein: Retrotransposon hot spot (RHS) protein, putative retrotransposon hot spot protein 1 (RHS1), putative

3D Structure

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Related Domains

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Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRestriction endonuclease-like(2008)

HH-groupRestriction endonuclease-like(2008.1)

TT-groupRestriction endonuclease-like(2008.1.1)

FFamilyRHSP(2008.1.1.118)

Pfam Families

Retrotransposon hot spot protein, P-loop domain

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: Q8IFI0 UniProt: Q8IFI0

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 616-805