ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q38EY4_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q38EY4_F1_nD1

Q38EY4_F1_nD1

UID: 003613928

AlphaFold

Range: 1-45
AlphaFold: AF-Q38EY4
UniProt: Q38EY4 (all domains)
Gene: Tb09.160.4220

Protein: Transcription factor IIB

3D Structure

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Related Domains

Browse other domains in TFIIB_Zn-ribbon_Tryp →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupRubredoxin-related(375.1)

TT-groupRubredoxin-related(375.1.1)

FFamilyTFIIB_Zn-ribbon_Tryp(375.1.1.137)

Pfam Families

PF22109Zn_ribbon_tTFIIB

Transcription factor IIB, zinc ribbon, Trypanosome

ClanCL0167Zn_Beta_Ribbon

External Links

AlphaFold DB: Q38EY4 UniProt: Q38EY4

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-45