ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q388Y3_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q388Y3_F1_nD1

Q388Y3_F1_nD1

UID: 003614860

AlphaFold

Range: 11-115,141-280,331-375
AlphaFold: AF-Q388Y3
UniProt: Q388Y3 (all domains)
Gene: Tb10.389.1060

Protein: Small RNA 2'-O-methyltransferase (EC 2.1.1.386)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Methyltransf_12 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyMethyltransf_12(2003.1.5.67)

Pfam Families

PF08242Methyltransf_12

Methyltransferase domain

ClanCL0063NADP_Rossmann

External Links

AlphaFold DB: Q388Y3 UniProt: Q388Y3

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 11-115,141-280,331-375