ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

A0A2K6VHA5_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/A0A2K6VHA5_F1_nD3

A0A2K6VHA5_F1_nD3

UID: 003616902

AlphaFold

Range: 481-515,561-670
AlphaFold: AF-A0A2K6VHA5
UniProt: A0A2K6VHA5 (all domains)

Protein: Pre-rRNA-processing protein TSR1 homolog

3D Structure

Loading viewer...

Related Domains

Browse other domains in RIBIOP_C →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupAminomethyltransferase beta-barrel domain(1.1.8)

FFamilyRIBIOP_C(1.1.8.2)

Pfam Families

PF04950RIBIOP_C

40S ribosome biogenesis protein Tsr1 and BMS1 C-terminal

ClanCL0866ALR_C-like

External Links

AlphaFold DB: A0A2K6VHA5 UniProt: A0A2K6VHA5

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 481-515,561-670